Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873922.1_cds_XP_016435317.1_31291
CDS Infomation

[gene=LOC107761596] [db_xref=GeneID:107761596] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016435317.1] [location=233..1615] [gbkey=CDS]
Sequence

ATGGCGAGGTTGCATTTCAATACCAATAAATCTGCAAATCAAATCTTTGAAGAAAGAGTT
AAGAACATGGAAAATTCGTCTATCAAATCCACTACCATATTCAAAGTAAATGTTGCGTTA
CGTGAATCAAATCCAGATGCTTATACCCCAAAGGTGATCTCCATTGGTCCTTACCATAAC
AAAATTCCTCAACTTGGCTCAATGGAAAAATACAAAATGTTGTACCTACAACGGTTTCTC
AAACGGAAAAATGAGATTGATGTGAAAAGTTGCATTAGTGAAATTGAGAAATTAAAAGAT
GAAGCACTAAAGTGTTACGATGATAACCTTGACAGTGACATTGTTGTCAAATTTTCACAA
ATGTTGTTGCTTGATGGCTGTTTTATAGTTGAGTTTATTCGAGAGCGTTGTGGAAGGAAG
CCAAGAGAAGAAGACGAAATCATCAACAGGGAATGGATGATGTTACAAGTATGTCGAGAC
ATGTTATTACTAGAAAACCAACTACCTTATTTTGTCCTCACCGTGTTACATGAAATGACT
AAGTATCCTACAGAACCAAACTTGATAAAGATGGTGAAATCTACATTCGATGATCGTTTC
CCAAATAAGTATCCCGAAATAATTGATGGCATTGCGCCTCAACAACCAGACCATTTACTT
CATGTGTTACATATGTTGTCTCGCCCATCAAAAATGCAAAATAATACTAGCGAAACCACG
AATGGTAGCACCCGAAAGGAATGTTGTAATAAAAGTTTTTTGGGGAAATTTATTCAAAAA
GAAATGCCCGACGAAGTTAGTGGTTGGGAATGCTGCCAAATTCCAAGTGCAACTGAACTT
TATGAAGCTGGAGTCAATTTCAAAAAAATAGGAGCTTTGGGAGAGGATATTAAGGATAAA
ACAACTTTATTTGATATCGAGTTTAAACATGGATTGTTTGAAATCCCTTGTTTTGCAGTT
GAAGATACATTGGAACCTTTCTTGAGAAATATGATAGCTTATGAGCAGCACTCGTCTAGG
TTACATCTTAAATATTATACGGATTATGGTTGGATAATGAGTCAACTTATTGTCTCACAT
AAAGATGTGAATCTTCTTCGCCAAAACGGAATCATATTTAACGAGATAGGAGATGACAAA
CAAGTGGCTACCATCTTCAACAAACTGACACAAGGGGTCACTACTTCTATTGACTTCTAC
TGCAGTGAAGAATGCAGCAAAATAATTCAACATTGTGAAAACCCATGGAATCAAATGATG
GCAAAATTGAGGCACAATTACTTTCAGAGTCCTTGGGCTGGAGCTTCAACTGTTGCAGCA
ATCGTGCTCCTCTTACTCACAGTTACACAGACAGTTCTATCTCTCATAAGTGCTCTTAAG
TAA

Peptide Sequence

PEP ID

XP_016435317.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MARLHFNTNKSANQIFEERVKNMENSSIKSTTIFKVNVALRESNPDAYTPKVISIGPYHN
KIPQLGSMEKYKMLYLQRFLKRKNEIDVKSCISEIEKLKDEALKCYDDNLDSDIVVKFSQ
MLLLDGCFIVEFIRERCGRKPREEDEIINREWMMLQVCRDMLLLENQLPYFVLTVLHEMT
KYPTEPNLIKMVKSTFDDRFPNKYPEIIDGIAPQQPDHLLHVLHMLSRPSKMQNNTSETT
NGSTRKECCNKSFLGKFIQKEMPDEVSGWECCQIPSATELYEAGVNFKKIGALGEDIKDK
TTLFDIEFKHGLFEIPCFAVEDTLEPFLRNMIAYEQHSSRLHLKYYTDYGWIMSQLIVSH
KDVNLLRQNGIIFNEIGDDKQVATIFNKLTQGVTTSIDFYCSEECSKIIQHCENPWNQMM
AKLRHNYFQSPWAGASTVAAIVLLLLTVTQTVLSLISALK

Transcript Sequence

Gene sequence data has not been registered.